Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
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[Homology]
Score
ENSAOCP00000007516Ectodermal-neural cortex 3. (547 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.763
LOC111579028
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.763
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.620
snx33
Sorting nexin.
      
 0.580
plagl2
Pleiomorphic adenoma gene-like 2.
    
 0.568
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.568
LOC111579015
NudC domain containing 3.
    
   0.554
nudcd3
NudC domain containing 3.
    
   0.554
zic1
Zic family member 1 (odd-paired homolog, Drosophila).
    
 0.548
vcpip1
Valosin containing protein (p97)/p47 complex interacting protein 1.
    
 
 0.545
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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