ewsr1 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000016807	HNRNPUL1	ENSAOCP00000016807	ENSAOCP00000021715	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.734
ENSAOCP00000016807	LOC111571372	ENSAOCP00000016807	ENSAOCP00000005063	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein M.	0.773
ENSAOCP00000016807	LOC111579909	ENSAOCP00000016807	ENSAOCP00000006538	Uncharacterized protein.	TAR DNA binding protein.	0.452
ENSAOCP00000016807	LOC111585121	ENSAOCP00000016807	ENSAOCP00000002762	Uncharacterized protein.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.797
ENSAOCP00000016807	ewsr1	ENSAOCP00000016807	ENSAOCP00000007535	Uncharacterized protein.	EWS RNA-binding protein 1b.	0.881
ENSAOCP00000016807	fus	ENSAOCP00000016807	ENSAOCP00000009727	Uncharacterized protein.	FUS RNA binding protein.	0.797
ENSAOCP00000016807	hnrnpu	ENSAOCP00000016807	ENSAOCP00000027157	Uncharacterized protein.	Heterogeneous nuclear ribonucleoprotein Ub.	0.734
ENSAOCP00000016807	tardbp	ENSAOCP00000016807	ENSAOCP00000015447	Uncharacterized protein.	TAR DNA binding protein, like.	0.452
HNRNPUL1	ENSAOCP00000016807	ENSAOCP00000021715	ENSAOCP00000016807	Heterogeneous nuclear ribonucleoprotein U like 1.	Uncharacterized protein.	0.734
HNRNPUL1	LOC111571372	ENSAOCP00000021715	ENSAOCP00000005063	Heterogeneous nuclear ribonucleoprotein U like 1.	Heterogeneous nuclear ribonucleoprotein M.	0.847
HNRNPUL1	LOC111579909	ENSAOCP00000021715	ENSAOCP00000006538	Heterogeneous nuclear ribonucleoprotein U like 1.	TAR DNA binding protein.	0.659
HNRNPUL1	LOC111585121	ENSAOCP00000021715	ENSAOCP00000002762	Heterogeneous nuclear ribonucleoprotein U like 1.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.771
HNRNPUL1	dhx9	ENSAOCP00000021715	ENSAOCP00000006969	Heterogeneous nuclear ribonucleoprotein U like 1.	DEAH (Asp-Glu-Ala-His) box helicase 9.	0.734
HNRNPUL1	ewsr1	ENSAOCP00000021715	ENSAOCP00000007535	Heterogeneous nuclear ribonucleoprotein U like 1.	EWS RNA-binding protein 1b.	0.841
HNRNPUL1	fus	ENSAOCP00000021715	ENSAOCP00000009727	Heterogeneous nuclear ribonucleoprotein U like 1.	FUS RNA binding protein.	0.790
HNRNPUL1	tardbp	ENSAOCP00000021715	ENSAOCP00000015447	Heterogeneous nuclear ribonucleoprotein U like 1.	TAR DNA binding protein, like.	0.659
LOC111571372	ENSAOCP00000016807	ENSAOCP00000005063	ENSAOCP00000016807	Heterogeneous nuclear ribonucleoprotein M.	Uncharacterized protein.	0.773
LOC111571372	HNRNPUL1	ENSAOCP00000005063	ENSAOCP00000021715	Heterogeneous nuclear ribonucleoprotein M.	Heterogeneous nuclear ribonucleoprotein U like 1.	0.847
LOC111571372	LOC111579909	ENSAOCP00000005063	ENSAOCP00000006538	Heterogeneous nuclear ribonucleoprotein M.	TAR DNA binding protein.	0.747
LOC111571372	LOC111585121	ENSAOCP00000005063	ENSAOCP00000002762	Heterogeneous nuclear ribonucleoprotein M.	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor.	0.772