Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
SRPK3SRSF protein kinase 3; Belongs to the protein kinase superfamily. (249 aa)    
Predicted Functional Partners:
ENSAOCP00000007593
Uncharacterized protein.
 
      0.899
ENSAOCP00000007522
Uncharacterized protein.
 
      0.881
LOC111575161
SRSF protein kinase 3-like.
 
      0.881
ENSAOCP00000029728
Uncharacterized protein.
 
      0.649
LOC111577759
Uncharacterized protein.
    
 
 0.587
LOC111570127
Serine and arginine rich splicing factor 1a.
    
 
 0.587
prpf38a
Pre-mRNA processing factor 38A.
    
 
 0.578
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
    
 
 0.567
snrnp27
Small nuclear ribonucleoprotein 27 (U4/U6.U5).
    
 
 0.560
LOC111588359
RNA binding motif protein 39b.
    
 
 0.556
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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