LOC111571260 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111562609	LOC111564218	ENSAOCP00000003027	ENSAOCP00000004218	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	0.900
LOC111562609	LOC111571260	ENSAOCP00000003027	ENSAOCP00000007563	Uncharacterized protein; Belongs to the DEAD box helicase family.	Ataxin 2-like.	0.831
LOC111562609	atxn2	ENSAOCP00000003027	ENSAOCP00000027300	Uncharacterized protein; Belongs to the DEAD box helicase family.	Ataxin 2.	0.890
LOC111562609	ddx6	ENSAOCP00000003027	ENSAOCP00000017707	Uncharacterized protein; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.901
LOC111562609	g3bp2	ENSAOCP00000003027	ENSAOCP00000018635	Uncharacterized protein; Belongs to the DEAD box helicase family.	Zgc:56304.	0.657
LOC111562609	lsm12	ENSAOCP00000003027	ENSAOCP00000030702	Uncharacterized protein; Belongs to the DEAD box helicase family.	LSM12 homolog b.	0.885
LOC111562609	ncbp2	ENSAOCP00000003027	ENSAOCP00000028162	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.707
LOC111562609	nufip2	ENSAOCP00000003027	ENSAOCP00000023821	Uncharacterized protein; Belongs to the DEAD box helicase family.	Nuclear FMR1 interacting protein 2.	0.876
LOC111564218	LOC111562609	ENSAOCP00000004218	ENSAOCP00000003027	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.900
LOC111564218	LOC111571260	ENSAOCP00000004218	ENSAOCP00000007563	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	Ataxin 2-like.	0.831
LOC111564218	atxn2	ENSAOCP00000004218	ENSAOCP00000027300	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	Ataxin 2.	0.890
LOC111564218	ddx6	ENSAOCP00000004218	ENSAOCP00000017707	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.901
LOC111564218	g3bp2	ENSAOCP00000004218	ENSAOCP00000018635	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	Zgc:56304.	0.657
LOC111564218	lsm12	ENSAOCP00000004218	ENSAOCP00000030702	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	LSM12 homolog b.	0.885
LOC111564218	ncbp2	ENSAOCP00000004218	ENSAOCP00000028162	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.707
LOC111564218	nufip2	ENSAOCP00000004218	ENSAOCP00000023821	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	Nuclear FMR1 interacting protein 2.	0.876
LOC111571260	LOC111562609	ENSAOCP00000007563	ENSAOCP00000003027	Ataxin 2-like.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.831
LOC111571260	LOC111564218	ENSAOCP00000007563	ENSAOCP00000004218	Ataxin 2-like.	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family.	0.831
LOC111571260	atxn2	ENSAOCP00000007563	ENSAOCP00000027300	Ataxin 2-like.	Ataxin 2.	0.774
LOC111571260	ddx6	ENSAOCP00000007563	ENSAOCP00000017707	Ataxin 2-like.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.831