Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
dctn2Dynactin 2 (p50). (404 aa)    
Predicted Functional Partners:
dctn3
Dynactin 3 (p22).
   
 0.999
actr10
Actin related protein 10; Belongs to the actin family.
   
 0.999
LOC111586732
Actin related protein 1, centractin.
   
 0.999
dctn4
Dynactin 4.
   
 0.999
dctn1
Dynactin 1a.
   
 0.999
dctn5
Dynactin 5.
    
 0.999
DCTN6
Dynactin subunit 6.
    
 0.996
LOC111566015
Uncharacterized protein.
    
 0.996
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
   
 0.981
zw10
Zw10 kinetochore protein.
    
 
 0.939
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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