STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000008092Ig-like domain-containing protein. (175 aa)    
Predicted Functional Partners:
LOC111577491
Galectin.
   
 0.556
ppp1r11
Protein phosphatase 1, regulatory (inhibitor) subunit 11.
      
 0.527
setd4
SET domain containing 4.
      
 0.524
CASK
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.435
LOC111575429
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.435
mrps23
Mitochondrial ribosomal protein S23.
      
 0.416
LOC111574042
Protocadherin 11.
    
 0.416
pcdh9
Protocadherin 9.
    
 0.416
LOC111582816
IGv domain-containing protein.
    
 
 0.404
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.