STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abat4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (500 aa)    
Predicted Functional Partners:
aldh5a1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.990
LOC111581226
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.955
aldh2
Aldehyde dehydrogenase 2 family member, tandem duplicate 2; Belongs to the aldehyde dehydrogenase family.
  
 0.955
ENSAOCP00000009170
Aldedh domain-containing protein.
  
 0.955
LOC111588076
Glutamate decarboxylase 1b.
  
 0.955
aldh3b1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.955
aldh16a1
Aldehyde dehydrogenase 16 family, member A1.
  
 0.955
gad1
Glutamate decarboxylase 1a.
  
 0.955
GADL1
Glutamate decarboxylase like 1.
  
 0.955
LOC111581222
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.955
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.