STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111571816Ankyrin repeat and EF-hand domain containing 1a. (571 aa)    
Predicted Functional Partners:
rsph14
Uncharacterized protein.
   
 
 0.673
LOC111564067
Radial spoke head component 4A.
   
   0.668
tekt3
Tektin 3.
   
   0.665
ENSAOCP00000004147
TSNAXIP1_N domain-containing protein.
   
  0.664
cfap99
Cilia and flagella associated protein 99.
   
  0.663
LOC111585512
F-box protein 36b.
   
 
  0.639
ccdc65
NYD-SP28 domain-containing protein.
   
    0.632
wdr5
WD repeat domain 5.
   
  0.462
wsb2
WD repeat and SOCS box containing 2.
   
  0.462
cfap52
Cilia and flagella associated protein 52.
   
  0.462
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.