STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111565860Uncharacterized protein. (247 aa)    
Predicted Functional Partners:
ENSAOCP00000003814
Uncharacterized protein.
   
 0.608
fech
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
    0.557
Ggact
Gamma-glutamylamine cyclotransferase, tandem duplicate 3.
   
  
 0.512
LOC111568140
SEC31 homolog B, COPII coat complex component.
    
 
 0.455
ankrd40
Ankyrin repeat domain 40.
    
 
 0.455
sec31a
SEC31 homolog A, COPII coat complex component.
    
 
 0.455
LOC111578764
Uncharacterized protein.
  
0.451
ENSAOCP00000024394
Uncharacterized protein.
  
0.449
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
    
 0.431
etfb
Electron transfer flavoprotein subunit beta.
      
 0.422
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.