STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnai2Dynein, axonemal, intermediate chain 2b. (637 aa)    
Predicted Functional Partners:
LOC111588582
NME/NM23 family member 8; Belongs to the NDK family.
    
 
 0.796
dctn2
Dynactin 2 (p50).
    
 0.789
dnal4
Dynein light chain.
    
 0.745
dync2li1
Dynein, cytoplasmic 2, light intermediate chain 1.
    
 0.715
dynlrb1
Dynein light chain roadblock.
   
 0.712
DYNLRB2
Dynein light chain roadblock.
   
 0.712
LOC111577259
Dynein light chain.
    
 0.698
DYNLL2
Dynein light chain.
    
 0.698
LOC111577739
Dynein light chain.
    
 0.698
LOC111587667
Tctex1 domain containing 1.
  
 
 0.693
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.