STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111571420Uncharacterized protein. (125 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
     
 0.704
ENSAOCP00000012448
PDZ domain-containing protein.
     
 0.704
ENSAOCP00000012478
C2 domain-containing protein.
     
 0.704
wdfy2
WD repeat and FYVE domain containing 2.
      
 0.562
RIMS1
Regulating synaptic membrane exocytosis 1.
     
 0.509
HECTD4
HECT domain E3 ubiquitin protein ligase 4.
    
 
 0.479
LOC111572069
Synaptotagmin IIa.
   
 
 0.455
LOC111570883
Synaptotagmin Ia.
   
 
 0.455
LOC111584615
Synaptotagmin Vb.
   
 
 0.455
LOC111571933
Synaptotagmin Ib.
   
 
 0.455
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.