LOC111585504 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111585504

ArfGAP with FG repeats 1b. (472 aa)

Predicted Functional Partners:

LOC111585014

0.953

ENSAOCP00000012646

0.953

ENSAOCP00000016650

0.953

LOC111574951

0.953

ENSAOCP00000021205

0.953

ENSAOCP00000021220

0.953

vamp7

0.792

itsn1

0.676

LOC111584719

0.645

fcho2

0.632

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAOCP00000012646	ENSAOCP00000016650	ENSAOCP00000012646	ENSAOCP00000016650	Uncharacterized protein.	EH domain-containing protein.	0.953
ENSAOCP00000012646	ENSAOCP00000021205	ENSAOCP00000012646	ENSAOCP00000021205	Uncharacterized protein.	Uncharacterized protein.	0.952
ENSAOCP00000012646	ENSAOCP00000021220	ENSAOCP00000012646	ENSAOCP00000021220	Uncharacterized protein.	DH domain-containing protein.	0.952
ENSAOCP00000012646	LOC111574951	ENSAOCP00000012646	ENSAOCP00000019383	Uncharacterized protein.	Uncharacterized protein.	0.952
ENSAOCP00000012646	LOC111584719	ENSAOCP00000012646	ENSAOCP00000014254	Uncharacterized protein.	FCH domain only 1.	0.982
ENSAOCP00000012646	LOC111585014	ENSAOCP00000012646	ENSAOCP00000005197	Uncharacterized protein.	Intersectin 2b.	0.952
ENSAOCP00000012646	LOC111585504	ENSAOCP00000012646	ENSAOCP00000010430	Uncharacterized protein.	ArfGAP with FG repeats 1b.	0.953
ENSAOCP00000012646	fcho2	ENSAOCP00000012646	ENSAOCP00000004593	Uncharacterized protein.	FCH domain only 2.	0.982
ENSAOCP00000012646	itsn1	ENSAOCP00000012646	ENSAOCP00000007504	Uncharacterized protein.	Intersectin 1 (SH3 domain protein).	0.948
ENSAOCP00000012646	vamp7	ENSAOCP00000012646	ENSAOCP00000013887	Uncharacterized protein.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.955
ENSAOCP00000016650	ENSAOCP00000012646	ENSAOCP00000016650	ENSAOCP00000012646	EH domain-containing protein.	Uncharacterized protein.	0.953
ENSAOCP00000016650	ENSAOCP00000021205	ENSAOCP00000016650	ENSAOCP00000021205	EH domain-containing protein.	Uncharacterized protein.	0.952
ENSAOCP00000016650	ENSAOCP00000021220	ENSAOCP00000016650	ENSAOCP00000021220	EH domain-containing protein.	DH domain-containing protein.	0.952
ENSAOCP00000016650	LOC111574951	ENSAOCP00000016650	ENSAOCP00000019383	EH domain-containing protein.	Uncharacterized protein.	0.952
ENSAOCP00000016650	LOC111584719	ENSAOCP00000016650	ENSAOCP00000014254	EH domain-containing protein.	FCH domain only 1.	0.982
ENSAOCP00000016650	LOC111585014	ENSAOCP00000016650	ENSAOCP00000005197	EH domain-containing protein.	Intersectin 2b.	0.952
ENSAOCP00000016650	LOC111585504	ENSAOCP00000016650	ENSAOCP00000010430	EH domain-containing protein.	ArfGAP with FG repeats 1b.	0.953
ENSAOCP00000016650	fcho2	ENSAOCP00000016650	ENSAOCP00000004593	EH domain-containing protein.	FCH domain only 2.	0.982
ENSAOCP00000016650	itsn1	ENSAOCP00000016650	ENSAOCP00000007504	EH domain-containing protein.	Intersectin 1 (SH3 domain protein).	0.948
ENSAOCP00000016650	vamp7	ENSAOCP00000016650	ENSAOCP00000013887	EH domain-containing protein.	Synaptobrevin-like 1; Belongs to the synaptobrevin family.	0.955