Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111588541 | LOC111589188 | ENSAOCP00000010923 | ENSAOCP00000010034 | Cytochrome b561. | Wu:fj05g07. | 0.601 |
LOC111588541 | gsr | ENSAOCP00000010923 | ENSAOCP00000016782 | Cytochrome b561. | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | 0.414 |
LOC111588541 | pam | ENSAOCP00000010923 | ENSAOCP00000017857 | Cytochrome b561. | Peptidylglycine alpha-amidating monooxygenase. | 0.577 |
LOC111588541 | pkdcc | ENSAOCP00000010923 | ENSAOCP00000026814 | Cytochrome b561. | Protein kinase domain containing, cytoplasmic b. | 0.515 |
LOC111588541 | slc31a1 | ENSAOCP00000010923 | ENSAOCP00000020832 | Cytochrome b561. | Solute carrier family 31 member 1. | 0.429 |
LOC111588541 | steap2 | ENSAOCP00000010923 | ENSAOCP00000010980 | Cytochrome b561. | STEAP family member 2, metalloreductase. | 0.558 |
LOC111589188 | LOC111588541 | ENSAOCP00000010034 | ENSAOCP00000010923 | Wu:fj05g07. | Cytochrome b561. | 0.601 |
gsr | LOC111588541 | ENSAOCP00000016782 | ENSAOCP00000010923 | Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family. | Cytochrome b561. | 0.414 |
pam | LOC111588541 | ENSAOCP00000017857 | ENSAOCP00000010923 | Peptidylglycine alpha-amidating monooxygenase. | Cytochrome b561. | 0.577 |
pkdcc | LOC111588541 | ENSAOCP00000026814 | ENSAOCP00000010923 | Protein kinase domain containing, cytoplasmic b. | Cytochrome b561. | 0.515 |
slc31a1 | LOC111588541 | ENSAOCP00000020832 | ENSAOCP00000010923 | Solute carrier family 31 member 1. | Cytochrome b561. | 0.429 |
steap2 | LOC111588541 | ENSAOCP00000010980 | ENSAOCP00000010923 | STEAP family member 2, metalloreductase. | Cytochrome b561. | 0.558 |