Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111569265 | LOC111573979 | ENSAOCP00000011601 | ENSAOCP00000015516 | Uncharacterized protein. | CXXC finger protein 1b. | 0.551 |
LOC111569265 | LOC111574437 | ENSAOCP00000011601 | ENSAOCP00000028799 | Uncharacterized protein. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. | 0.652 |
LOC111569265 | LOC111585599 | ENSAOCP00000011601 | ENSAOCP00000024690 | Uncharacterized protein. | CXXC finger protein 1a. | 0.551 |
LOC111569265 | SH3RF3 | ENSAOCP00000011601 | ENSAOCP00000006370 | Uncharacterized protein. | SH3 domain containing ring finger 3. | 0.540 |
LOC111569265 | ccdc36 | ENSAOCP00000011601 | ENSAOCP00000019812 | Uncharacterized protein. | Uncharacterized protein. | 0.501 |
LOC111569265 | med8 | ENSAOCP00000011601 | ENSAOCP00000019055 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.544 |
LOC111569265 | plod2 | ENSAOCP00000011601 | ENSAOCP00000019998 | Uncharacterized protein. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. | 0.652 |
LOC111569265 | plod3 | ENSAOCP00000011601 | ENSAOCP00000005571 | Uncharacterized protein. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. | 0.652 |
LOC111569265 | rai1 | ENSAOCP00000011601 | ENSAOCP00000004204 | Uncharacterized protein. | Retinoic acid induced 1. | 0.547 |
LOC111569265 | spo11 | ENSAOCP00000011601 | ENSAOCP00000003549 | Uncharacterized protein. | SPO11 initiator of meiotic double stranded breaks. | 0.631 |
LOC111573979 | LOC111569265 | ENSAOCP00000015516 | ENSAOCP00000011601 | CXXC finger protein 1b. | Uncharacterized protein. | 0.551 |
LOC111573979 | ccdc36 | ENSAOCP00000015516 | ENSAOCP00000019812 | CXXC finger protein 1b. | Uncharacterized protein. | 0.442 |
LOC111573979 | spo11 | ENSAOCP00000015516 | ENSAOCP00000003549 | CXXC finger protein 1b. | SPO11 initiator of meiotic double stranded breaks. | 0.487 |
LOC111574437 | LOC111569265 | ENSAOCP00000028799 | ENSAOCP00000011601 | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. | Uncharacterized protein. | 0.652 |
LOC111574437 | plod2 | ENSAOCP00000028799 | ENSAOCP00000019998 | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. | 0.901 |
LOC111574437 | plod3 | ENSAOCP00000028799 | ENSAOCP00000005571 | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a. | Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3. | 0.901 |
LOC111585599 | LOC111569265 | ENSAOCP00000024690 | ENSAOCP00000011601 | CXXC finger protein 1a. | Uncharacterized protein. | 0.551 |
LOC111585599 | ccdc36 | ENSAOCP00000024690 | ENSAOCP00000019812 | CXXC finger protein 1a. | Uncharacterized protein. | 0.442 |
LOC111585599 | spo11 | ENSAOCP00000024690 | ENSAOCP00000003549 | CXXC finger protein 1a. | SPO11 initiator of meiotic double stranded breaks. | 0.487 |
SH3RF3 | LOC111569265 | ENSAOCP00000006370 | ENSAOCP00000011601 | SH3 domain containing ring finger 3. | Uncharacterized protein. | 0.540 |
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