STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111581921Solute carrier family 38 member 3a. (523 aa)    
Predicted Functional Partners:
LOC111572999
Ras-related GTP binding A.
   
 0.631
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.596
lamtor1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.581
lamtor5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
    
 0.571
Lamtor4
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 4.
    
 0.535
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
 0.490
ENSAOCP00000012448
PDZ domain-containing protein.
   
 
 0.490
ENSAOCP00000012478
C2 domain-containing protein.
   
 
 0.490
LOC111580598
Ras-related GTP binding Ca.
    
 0.423
LOC111566501
Ras-related GTP binding D.
    
 0.423
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.