Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CNP | LOC111565559 | ENSAOCP00000008159 | ENSAOCP00000017712 | 2',3'-cyclic nucleotide 3' phosphodiesterase. | Proteolipid protein 1a. | 0.448 |
CNP | olig2 | ENSAOCP00000008159 | ENSAOCP00000012991 | 2',3'-cyclic nucleotide 3' phosphodiesterase. | Oligodendrocyte lineage transcription factor 2. | 0.483 |
LOC111565517 | olig2 | ENSAOCP00000002285 | ENSAOCP00000012991 | Inhibitor of DNA binding 4. | Oligodendrocyte lineage transcription factor 2. | 0.603 |
LOC111565559 | CNP | ENSAOCP00000017712 | ENSAOCP00000008159 | Proteolipid protein 1a. | 2',3'-cyclic nucleotide 3' phosphodiesterase. | 0.448 |
LOC111565559 | olig2 | ENSAOCP00000017712 | ENSAOCP00000012991 | Proteolipid protein 1a. | Oligodendrocyte lineage transcription factor 2. | 0.425 |
LOC111565559 | sox10 | ENSAOCP00000017712 | ENSAOCP00000000344 | Proteolipid protein 1a. | SRY-box transcription factor 10. | 0.520 |
LOC111582656 | irx3 | ENSAOCP00000018378 | ENSAOCP00000021099 | NK2 homeobox 2b. | Iroquois homeobox 3a. | 0.423 |
LOC111582656 | olig2 | ENSAOCP00000018378 | ENSAOCP00000012991 | NK2 homeobox 2b. | Oligodendrocyte lineage transcription factor 2. | 0.581 |
LOC111582656 | sox10 | ENSAOCP00000018378 | ENSAOCP00000000344 | NK2 homeobox 2b. | SRY-box transcription factor 10. | 0.453 |
LOC111586686 | irx3 | ENSAOCP00000015779 | ENSAOCP00000021099 | NK2 homeobox 2a. | Iroquois homeobox 3a. | 0.423 |
LOC111586686 | olig2 | ENSAOCP00000015779 | ENSAOCP00000012991 | NK2 homeobox 2a. | Oligodendrocyte lineage transcription factor 2. | 0.581 |
LOC111586686 | sox10 | ENSAOCP00000015779 | ENSAOCP00000000344 | NK2 homeobox 2a. | SRY-box transcription factor 10. | 0.453 |
LOC111588886 | elavl3 | ENSAOCP00000000688 | ENSAOCP00000001964 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | ELAV-like protein; Belongs to the RRM elav family. | 0.587 |
LOC111588886 | olig2 | ENSAOCP00000000688 | ENSAOCP00000012991 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | Oligodendrocyte lineage transcription factor 2. | 0.588 |
LOC111588886 | sox10 | ENSAOCP00000000688 | ENSAOCP00000000344 | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | SRY-box transcription factor 10. | 0.415 |
elavl3 | LOC111588886 | ENSAOCP00000001964 | ENSAOCP00000000688 | ELAV-like protein; Belongs to the RRM elav family. | Glial fibrillary acidic protein; Belongs to the intermediate filament family. | 0.587 |
elavl3 | olig2 | ENSAOCP00000001964 | ENSAOCP00000012991 | ELAV-like protein; Belongs to the RRM elav family. | Oligodendrocyte lineage transcription factor 2. | 0.436 |
elavl3 | sox10 | ENSAOCP00000001964 | ENSAOCP00000000344 | ELAV-like protein; Belongs to the RRM elav family. | SRY-box transcription factor 10. | 0.429 |
irx3 | LOC111582656 | ENSAOCP00000021099 | ENSAOCP00000018378 | Iroquois homeobox 3a. | NK2 homeobox 2b. | 0.423 |
irx3 | LOC111586686 | ENSAOCP00000021099 | ENSAOCP00000015779 | Iroquois homeobox 3a. | NK2 homeobox 2a. | 0.423 |
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