STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dspDesmoplakin a. (2275 aa)    
Predicted Functional Partners:
itgb4
Integrin beta.
   
 0.708
LOC111579004
Desmocollin 2 like; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
   
 0.576
LOC111582920
Uncharacterized protein.
   
 0.567
LOC111566303
Junction plakoglobin a.
   
 0.567
perp
P53 apoptosis effector related to pmp22.
   
 
 0.492
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.470
LOC111573771
Uncharacterized protein.
    
 0.470
LOC111566430
Uncharacterized protein; Component of intercellular desmosome junctions. Involved in the interaction of plaque proteins and intermediate filaments mediating cell-cell adhesion.
  
 0.457
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.453
LOC111582258
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
 0.452
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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