STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chmp4bUncharacterized protein. (222 aa)    
Predicted Functional Partners:
pdcd6ip
Programmed cell death 6 interacting protein.
   
 0.989
chmp7
Charged multivesicular body protein 7.
    
 0.983
chmp3
Charged multivesicular body protein 3.
   
 0.962
chmp2a
Charged multivesicular body protein 2A.
   
 0.953
MLKL
Mixed lineage kinase domain like pseudokinase.
    
 0.902
ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 0.894
ist1
IST1 factor associated with ESCRT-III.
    
 0.892
snf8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
    
 0.889
LOC111579569
Charged multivesicular body protein 6.
    
0.879
LOC111564660
Charged multivesicular body protein 6a.
    
0.879
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.