STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000015831Uncharacterized protein. (109 aa)    
Predicted Functional Partners:
TEAD4
TEA domain transcription factor 4.
    
 
 0.620
TEAD1
TEA domain family member 1b.
    
 
 0.620
LOC111573851
TEA domain transcription factor 3.
    
 
 0.620
LOC111587002
YBD domain-containing protein.
    
 
 0.620
cenpt
CENP-T_C domain-containing protein.
    
 
 0.609
ankrd22
Ankyrin repeat domain 22.
      
 0.420
LOC111588717
Vestigial-like family member 4a.
      
 0.408
vgll4
Vestigial-like family member 4b.
      
 0.408
slc26a5
Solute carrier family 26 member 5.
      
 0.408
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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