STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111565600SEC14-like lipid binding 8. (413 aa)    
Predicted Functional Partners:
sumf1
Sulfatase modifying factor 1.
    
 0.468
sec63
SEC63 homolog, protein translocation regulator.
   
 
 0.458
dgat2
Diacylglycerol O-acyltransferase 2.
   
 
 0.447
LOC111583755
Phospholipase.
   
 
 0.432
LOC111569664
Phospholipase.
   
 
 0.432
LOC111577646
Phospholipase.
   
 
 0.425
ankfy1
Ankyrin repeat and FYVE domain containing 1.
    
 0.420
sestd1
SEC14 and spectrin domains 1.
      
 0.414
scarb1
Scavenger receptor class B, member 1; Belongs to the CD36 family.
   
  
 0.409
LOC111577661
Monoacylglycerol O-acyltransferase 3b.
   
 
 0.403
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.