Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111563371 | LOC111574965 | ENSAOCP00000017299 | ENSAOCP00000016546 | Zgc:153031. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | 0.950 |
LOC111563371 | LOC111582037 | ENSAOCP00000017299 | ENSAOCP00000002722 | Zgc:153031. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.974 |
LOC111563371 | amt | ENSAOCP00000017299 | ENSAOCP00000010063 | Zgc:153031. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.969 |
LOC111563371 | atic | ENSAOCP00000017299 | ENSAOCP00000007548 | Zgc:153031. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.957 |
LOC111563371 | fpgs | ENSAOCP00000017299 | ENSAOCP00000007784 | Zgc:153031. | Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family. | 0.991 |
LOC111563371 | gart | ENSAOCP00000017299 | ENSAOCP00000019438 | Zgc:153031. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.973 |
LOC111563371 | mtfmt | ENSAOCP00000017299 | ENSAOCP00000013340 | Zgc:153031. | Mitochondrial methionyl-tRNA formyltransferase. | 0.959 |
LOC111563371 | mthfd1 | ENSAOCP00000017299 | ENSAOCP00000013821 | Zgc:153031. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 0.950 |
LOC111563371 | shmt1 | ENSAOCP00000017299 | ENSAOCP00000014851 | Zgc:153031. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.974 |
LOC111563371 | tyms | ENSAOCP00000017299 | ENSAOCP00000017580 | Zgc:153031. | Thymidylate synthetase. | 0.999 |
LOC111574965 | LOC111563371 | ENSAOCP00000016546 | ENSAOCP00000017299 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Zgc:153031. | 0.950 |
LOC111574965 | LOC111582037 | ENSAOCP00000016546 | ENSAOCP00000002722 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.976 |
LOC111574965 | amt | ENSAOCP00000016546 | ENSAOCP00000010063 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family. | 0.950 |
LOC111574965 | atic | ENSAOCP00000016546 | ENSAOCP00000007548 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase. | 0.982 |
LOC111574965 | fpgs | ENSAOCP00000016546 | ENSAOCP00000007784 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Folylpolyglutamate synthase; Catalyzes conversion of folates to polyglutamate derivatives allowing concentration of folate compounds in the cell and the intracellular retention of these cofactors, which are important substrates for most of the folate-dependent enzymes that are involved in one-carbon transfer reactions involved in purine, pyrimidine and amino acid synthesis; Belongs to the folylpolyglutamate synthase family. | 0.818 |
LOC111574965 | gart | ENSAOCP00000016546 | ENSAOCP00000019438 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.999 |
LOC111574965 | mtfmt | ENSAOCP00000016546 | ENSAOCP00000013340 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Mitochondrial methionyl-tRNA formyltransferase. | 0.666 |
LOC111574965 | mthfd1 | ENSAOCP00000016546 | ENSAOCP00000013821 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1b. | 0.901 |
LOC111574965 | shmt1 | ENSAOCP00000016546 | ENSAOCP00000014851 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family. | 0.976 |
LOC111574965 | tyms | ENSAOCP00000016546 | ENSAOCP00000017580 | Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like. | Thymidylate synthetase. | 0.549 |
page 1 of 6