STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111574943Ankyrin repeat and SOCS box containing 1. (336 aa)    
Predicted Functional Partners:
LOC111563030
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.727
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.727
asb6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.689
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.681
rnf7
Ring finger protein 7.
    
 0.623
commd1
Copper metabolism (Murr1) domain containing 1.
    
  0.575
LOC111587906
COMM domain containing 4.
    
 0.573
commd9
COMM domain containing 9.
   
  0.569
commd2
COMM domain containing 2.
    
  0.557
LOC111565194
COMM domain containing 5.
    
  0.551
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.