Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111577936 | derl1 | ENSAOCP00000029123 | ENSAOCP00000006469 | Zgc:136908; Belongs to the AAA ATPase family. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.967 |
LOC111577936 | faap100 | ENSAOCP00000029123 | ENSAOCP00000030553 | Zgc:136908; Belongs to the AAA ATPase family. | Si:dkey-57h18.1. | 0.889 |
LOC111577936 | faf1 | ENSAOCP00000029123 | ENSAOCP00000018870 | Zgc:136908; Belongs to the AAA ATPase family. | Fas (TNFRSF6) associated factor 1. | 0.952 |
LOC111577936 | nploc4 | ENSAOCP00000029123 | ENSAOCP00000013086 | Zgc:136908; Belongs to the AAA ATPase family. | NPL4 homolog, ubiquitin recognition factor. | 0.890 |
LOC111577936 | plaa | ENSAOCP00000029123 | ENSAOCP00000012147 | Zgc:136908; Belongs to the AAA ATPase family. | Phospholipase A2-activating protein. | 0.885 |
LOC111577936 | ubxn7 | ENSAOCP00000029123 | ENSAOCP00000024128 | Zgc:136908; Belongs to the AAA ATPase family. | UBX domain protein 7. | 0.999 |
LOC111577936 | ufd1 | ENSAOCP00000029123 | ENSAOCP00000019677 | Zgc:136908; Belongs to the AAA ATPase family. | Ubiquitin recognition factor in ER associated degradation 1. | 0.974 |
LOC111577936 | vcp | ENSAOCP00000029123 | ENSAOCP00000009925 | Zgc:136908; Belongs to the AAA ATPase family. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.900 |
LOC111577936 | yod1 | ENSAOCP00000029123 | ENSAOCP00000020478 | Zgc:136908; Belongs to the AAA ATPase family. | YOD1 deubiquitinase. | 0.942 |
derl1 | LOC111577936 | ENSAOCP00000006469 | ENSAOCP00000029123 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Zgc:136908; Belongs to the AAA ATPase family. | 0.967 |
derl1 | faap100 | ENSAOCP00000006469 | ENSAOCP00000030553 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Si:dkey-57h18.1. | 0.932 |
derl1 | faf1 | ENSAOCP00000006469 | ENSAOCP00000018870 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Fas (TNFRSF6) associated factor 1. | 0.692 |
derl1 | katnal2 | ENSAOCP00000006469 | ENSAOCP00000017767 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays. | 0.888 |
derl1 | nploc4 | ENSAOCP00000006469 | ENSAOCP00000013086 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | NPL4 homolog, ubiquitin recognition factor. | 0.932 |
derl1 | plaa | ENSAOCP00000006469 | ENSAOCP00000012147 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Phospholipase A2-activating protein. | 0.593 |
derl1 | ufd1 | ENSAOCP00000006469 | ENSAOCP00000019677 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Ubiquitin recognition factor in ER associated degradation 1. | 0.972 |
derl1 | vcp | ENSAOCP00000006469 | ENSAOCP00000009925 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Valosin containing protein; Belongs to the AAA ATPase family. | 0.967 |
faap100 | LOC111577936 | ENSAOCP00000030553 | ENSAOCP00000029123 | Si:dkey-57h18.1. | Zgc:136908; Belongs to the AAA ATPase family. | 0.889 |
faap100 | derl1 | ENSAOCP00000030553 | ENSAOCP00000006469 | Si:dkey-57h18.1. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.932 |
faap100 | faf1 | ENSAOCP00000030553 | ENSAOCP00000018870 | Si:dkey-57h18.1. | Fas (TNFRSF6) associated factor 1. | 0.870 |
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