STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
thumpd3THUMP domain containing 3. (496 aa)    
Predicted Functional Partners:
LOC111585014
Intersectin 2b.
   
 0.756
ENSAOCP00000012646
Uncharacterized protein.
   
 0.756
ENSAOCP00000016650
EH domain-containing protein.
   
 0.756
LOC111574951
Uncharacterized protein.
   
 0.756
ENSAOCP00000021205
Uncharacterized protein.
   
 0.756
ENSAOCP00000021220
DH domain-containing protein.
   
 0.756
setd5
SET domain containing 5.
      
 0.666
itsn1
Intersectin 1 (SH3 domain protein).
   
 0.630
LOC111574857
Growth arrest-specific 7a.
    
 0.538
LOC111572495
Uncharacterized protein.
    
 0.538
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.