STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppanPeter pan homolog. (534 aa)    
Predicted Functional Partners:
rrp15
Ribosomal RNA processing 15 homolog.
   
 
 0.977
rsl1d1
Ribosomal L1 domain containing 1.
   
   0.960
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.957
rpf1
Ribosome production factor 1 homolog.
   
 
 0.947
ddx27
DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.
   
   0.946
rbm28
RNA binding motif protein 28.
   
   0.944
wdr74
WD repeat domain 74.
   
 
 0.944
LOC111572775
Uncharacterized protein.
   
 
 0.939
rsl24d1
Ribosomal L24 domain containing 1.
   
 
 0.931
nifk
Nucleolar protein interacting with the FHA domain of MKI67.
   
   0.927
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.