STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111568384WASH complex subunit 3. (187 aa)    
Predicted Functional Partners:
washc1
WAS protein family homolog 1.
    
 0.914
LOC111571961
Heat shock factor binding protein 1a.
    
 
 0.886
washc5
WASH complex subunit 5.
    
 0.864
washc4
WASH complex subunit 4.
    
 0.850
LOC111564367
CAP-ZIP_m domain-containing protein.
    
 
 0.782
LOC111583893
Uncharacterized protein.
    
 
 0.781
LOC111563622
Zgc:153184.
    
 
 0.601
LOC111585779
Duboraya.
    
 
 0.601
nup37
Nucleoporin 37.
 
 
  
 0.457
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 
 0.451
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.