Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111564432 | LOC111572897 | ENSAOCP00000000746 | ENSAOCP00000025533 | MBD domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.782 |
LOC111564432 | LOC111577897 | ENSAOCP00000000746 | ENSAOCP00000014052 | MBD domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.782 |
LOC111564432 | LOC111577903 | ENSAOCP00000000746 | ENSAOCP00000016648 | MBD domain-containing protein. | Metastasis associated 1 family, member 3. | 0.821 |
LOC111564432 | LOC111585703 | ENSAOCP00000000746 | ENSAOCP00000022863 | MBD domain-containing protein. | Uncharacterized protein. | 0.724 |
LOC111564432 | RBBP4 | ENSAOCP00000000746 | ENSAOCP00000000517 | MBD domain-containing protein. | RB binding protein 4, chromatin remodeling factor. | 0.782 |
LOC111564432 | arid4a | ENSAOCP00000000746 | ENSAOCP00000001710 | MBD domain-containing protein. | AT rich interactive domain 4A (RBP1-like). | 0.632 |
LOC111564432 | arid4b | ENSAOCP00000000746 | ENSAOCP00000000482 | MBD domain-containing protein. | Translocase of outer mitochondrial membrane 20. | 0.632 |
LOC111564432 | kdm1a | ENSAOCP00000000746 | ENSAOCP00000027418 | MBD domain-containing protein. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.640 |
LOC111564432 | mta1 | ENSAOCP00000000746 | ENSAOCP00000014602 | MBD domain-containing protein. | Metastasis associated 1. | 0.821 |
LOC111564432 | mta2 | ENSAOCP00000000746 | ENSAOCP00000031192 | MBD domain-containing protein. | Metastasis associated 1 family, member 2. | 0.821 |
LOC111572897 | LOC111564432 | ENSAOCP00000025533 | ENSAOCP00000000746 | WD_REPEATS_REGION domain-containing protein. | MBD domain-containing protein. | 0.782 |
LOC111572897 | LOC111577897 | ENSAOCP00000025533 | ENSAOCP00000014052 | WD_REPEATS_REGION domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.900 |
LOC111572897 | LOC111577903 | ENSAOCP00000025533 | ENSAOCP00000016648 | WD_REPEATS_REGION domain-containing protein. | Metastasis associated 1 family, member 3. | 0.834 |
LOC111572897 | LOC111585703 | ENSAOCP00000025533 | ENSAOCP00000022863 | WD_REPEATS_REGION domain-containing protein. | Uncharacterized protein. | 0.758 |
LOC111572897 | RBBP4 | ENSAOCP00000025533 | ENSAOCP00000000517 | WD_REPEATS_REGION domain-containing protein. | RB binding protein 4, chromatin remodeling factor. | 0.900 |
LOC111572897 | arid4a | ENSAOCP00000025533 | ENSAOCP00000001710 | WD_REPEATS_REGION domain-containing protein. | AT rich interactive domain 4A (RBP1-like). | 0.990 |
LOC111572897 | arid4b | ENSAOCP00000025533 | ENSAOCP00000000482 | WD_REPEATS_REGION domain-containing protein. | Translocase of outer mitochondrial membrane 20. | 0.990 |
LOC111572897 | kdm1a | ENSAOCP00000025533 | ENSAOCP00000027418 | WD_REPEATS_REGION domain-containing protein. | Lysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. | 0.819 |
LOC111572897 | mta1 | ENSAOCP00000025533 | ENSAOCP00000014602 | WD_REPEATS_REGION domain-containing protein. | Metastasis associated 1. | 0.833 |
LOC111572897 | mta2 | ENSAOCP00000025533 | ENSAOCP00000031192 | WD_REPEATS_REGION domain-containing protein. | Metastasis associated 1 family, member 2. | 0.833 |
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