Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111568378 | lhx5 | ENSAOCP00000021480 | ENSAOCP00000023042 | Empty spiracles homeobox 1. | LIM homeobox 5. | 0.402 |
LOC111578862 | lhx5 | ENSAOCP00000023407 | ENSAOCP00000023042 | LIM domain binding 1a. | LIM homeobox 5. | 0.452 |
LOC111581958 | lhx5 | ENSAOCP00000004736 | ENSAOCP00000023042 | LIM-domain binding 1b. | LIM homeobox 5. | 0.452 |
ccnk | lhx5 | ENSAOCP00000009441 | ENSAOCP00000023042 | Cyclin K; Belongs to the cyclin family. | LIM homeobox 5. | 0.816 |
ldb2 | lhx5 | ENSAOCP00000019311 | ENSAOCP00000023042 | LIM domain binding 2a. | LIM homeobox 5. | 0.452 |
lhx5 | LOC111568378 | ENSAOCP00000023042 | ENSAOCP00000021480 | LIM homeobox 5. | Empty spiracles homeobox 1. | 0.402 |
lhx5 | LOC111578862 | ENSAOCP00000023042 | ENSAOCP00000023407 | LIM homeobox 5. | LIM domain binding 1a. | 0.452 |
lhx5 | LOC111581958 | ENSAOCP00000023042 | ENSAOCP00000004736 | LIM homeobox 5. | LIM-domain binding 1b. | 0.452 |
lhx5 | ccnk | ENSAOCP00000023042 | ENSAOCP00000009441 | LIM homeobox 5. | Cyclin K; Belongs to the cyclin family. | 0.816 |
lhx5 | ldb2 | ENSAOCP00000023042 | ENSAOCP00000019311 | LIM homeobox 5. | LIM domain binding 2a. | 0.452 |