STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000023536Uncharacterized protein. (146 aa)    
Predicted Functional Partners:
LOC111565049
Im:7152348.
   
 0.427
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.425
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.425
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.418
slf1
SMC5-SMC6 complex localization factor 1.
   
 0.414
znf593
Zinc finger protein 593.
      
 0.414
LOC111574876
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.409
rbpjl
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.409
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.409
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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