STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppp4r3aSMEK homolog 1, suppressor of mek1 (Dictyostelium). (820 aa)    
Predicted Functional Partners:
ppp4c
Serine/threonine-protein phosphatase.
   
 
 0.951
LOC111572084
Protein phosphatase 4, regulatory subunit 2a.
   
 
 0.910
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
   
 
 0.910
ptpa
Serine/threonine-protein phosphatase 2A activator; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
    
 
 0.848
krtcap2
Keratinocyte associated protein 2.
    
 
 0.677
chek2
Checkpoint kinase 2.
    
 
 0.662
supt5h
Transcription elongation factor SPT5.
    
 
 0.639
ppp4r3b
Protein phosphatase 4, regulatory subunit 3B.
  
 
0.610
ppp4r1
WRNPLPNID domain-containing protein.
      
 0.593
hmg20a
High mobility group 20A.
      
 0.559
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.