STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111582325GATA-type domain-containing protein. (456 aa)    
Predicted Functional Partners:
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.704
LOC111577897
WD_REPEATS_REGION domain-containing protein.
   
 0.704
LOC111572897
WD_REPEATS_REGION domain-containing protein.
   
 0.704
LOC111564432
MBD domain-containing protein.
   
 0.689
LOC111567960
Methyl-CpG binding domain protein 3a.
   
 0.689
ENSAOCP00000007370
Autoimmune regulator.
   
 0.685
LOC111571070
Uncharacterized protein.
   
 0.685
chd5
Chromodomain helicase DNA binding protein 5.
   
 0.685
chd3
Chromodomain helicase DNA binding protein 3.
   
 0.685
LOC111585703
Uncharacterized protein.
   
 0.685
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.