STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111578693RAB4B, member RAS oncogene family. (227 aa)    
Predicted Functional Partners:
rbsn
Rabenosyn, RAB effector.
    
 
 0.879
LOC111585014
Intersectin 2b.
    
 0.788
ENSAOCP00000012646
Uncharacterized protein.
    
 0.788
ENSAOCP00000016650
EH domain-containing protein.
    
 0.788
LOC111574951
Uncharacterized protein.
    
 0.788
ENSAOCP00000021205
Uncharacterized protein.
    
 0.788
ENSAOCP00000021220
DH domain-containing protein.
    
 0.788
tbc1d16
TBC1 domain family, member 16.
    
 0.700
itsn1
Intersectin 1 (SH3 domain protein).
    
 0.696
LOC111574952
Macrophage stimulating 1 receptor a.
   
 0.682
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.