LOC111574155 protein (Amphiprion ocellaris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC111574155

Adenylate kinase 7b. (682 aa)

Predicted Functional Partners:

atp5f1c

0.816

atp5po

0.771

rps15

0.750

LOC111585397

0.749

rpl11

0.746

rpl23

0.745

rps3

0.744

rps18

0.741

rps11

0.740

adsl

0.727

Your Current Organism:

Amphiprion ocellaris

NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC111574155	LOC111585397	ENSAOCP00000026310	ENSAOCP00000028974	Adenylate kinase 7b.	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	0.749
LOC111574155	adsl	ENSAOCP00000026310	ENSAOCP00000024950	Adenylate kinase 7b.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.727
LOC111574155	atp5f1c	ENSAOCP00000026310	ENSAOCP00000012905	Adenylate kinase 7b.	ATP synthase subunit gamma.	0.816
LOC111574155	atp5po	ENSAOCP00000026310	ENSAOCP00000003639	Adenylate kinase 7b.	ATP synthase peripheral stalk subunit OSCP.	0.771
LOC111574155	rpl11	ENSAOCP00000026310	ENSAOCP00000017066	Adenylate kinase 7b.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.746
LOC111574155	rpl23	ENSAOCP00000026310	ENSAOCP00000001802	Adenylate kinase 7b.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.745
LOC111574155	rps11	ENSAOCP00000026310	ENSAOCP00000028509	Adenylate kinase 7b.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.740
LOC111574155	rps15	ENSAOCP00000026310	ENSAOCP00000014329	Adenylate kinase 7b.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.750
LOC111574155	rps18	ENSAOCP00000026310	ENSAOCP00000018262	Adenylate kinase 7b.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.741
LOC111574155	rps3	ENSAOCP00000026310	ENSAOCP00000009508	Adenylate kinase 7b.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.744
LOC111585397	LOC111574155	ENSAOCP00000028974	ENSAOCP00000026310	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Adenylate kinase 7b.	0.749
LOC111585397	adsl	ENSAOCP00000028974	ENSAOCP00000024950	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	0.568
LOC111585397	atp5f1c	ENSAOCP00000028974	ENSAOCP00000012905	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	ATP synthase subunit gamma.	0.643
LOC111585397	atp5po	ENSAOCP00000028974	ENSAOCP00000003639	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	ATP synthase peripheral stalk subunit OSCP.	0.832
LOC111585397	rpl11	ENSAOCP00000028974	ENSAOCP00000017066	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.	0.997
LOC111585397	rpl23	ENSAOCP00000028974	ENSAOCP00000001802	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.997
LOC111585397	rps11	ENSAOCP00000028974	ENSAOCP00000028509	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.	0.999
LOC111585397	rps15	ENSAOCP00000028974	ENSAOCP00000014329	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
LOC111585397	rps18	ENSAOCP00000028974	ENSAOCP00000018262	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.	0.999
LOC111585397	rps3	ENSAOCP00000028974	ENSAOCP00000009508	Eukaryotic translation initiation factor 1A X-linked b; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.	Ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.999