STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chchd7Coiled-coil-helix-coiled-coil-helix domain containing 7. (85 aa)    
Predicted Functional Partners:
LOC111568439
Cytochrome c oxidase assembly homolog 11 (yeast).
   
  
 0.626
cmc2
COX assembly mitochondrial protein.
   
 
 0.600
ENSAOCP00000011141
Uncharacterized protein.
      
 0.584
LOC111570576
Cytochrome c oxidase copper chaperone COX17.
   
 
 0.570
LOC111586820
Cytochrome c oxidase copper chaperone-like.
   
 
 0.570
sdr16c5
Short chain dehydrogenase/reductase family 16C, member 5a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.568
ppp2r2d
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
      
 0.567
LOC111579232
Cytochrome c oxidase assembly homolog 15 (yeast).
      
 0.560
impad1
Inositol monophosphatase domain containing 1.
      
 0.525
LOC111565273
Cytochrome C oxidase assembly factor 5.
   
  
 0.510
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.