STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111572820ABC transporter domain-containing protein. (238 aa)    
Predicted Functional Partners:
katnal2
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
  
 0.562
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.532
LOC111566545
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
   
  
 0.508
ENSAOCP00000003884
Uncharacterized protein.
  
 0.490
LOC111578733
Ubiquitin-like domain-containing protein.
     
 0.480
LOC111572078
Ubiquitin-conjugating enzyme E2 variant 1.
     
 0.479
abcb7
ATP-binding cassette, sub-family B (MDR/TAP), member 7.
    
0.471
acacb
Acetyl-CoA carboxylase beta.
   
 
 0.463
acaca
Acetyl-CoA carboxylase alpha.
   
 
 0.463
icmt
Protein-S-isoprenylcysteine O-methyltransferase.
  
  
 0.446
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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