STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000027416Uncharacterized protein. (564 aa)    
Predicted Functional Partners:
trip12
Thyroid hormone receptor interactor 12.
   
 
 0.782
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.630
rps27a
Ribosomal protein S27a.
   
 0.601
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.568
LOC111566873
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.568
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
    
 0.506
zfand4
Zinc finger, AN1-type domain 4.
   
 0.464
LOC111588558
Uncharacterized protein.
   
 0.462
LOC111588557
Polyubiquitin-like.
   
 0.462
LOC111578652
Ubiquitin like 4A.
   
 0.462
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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