Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111564821 | ereg | ENSAOCP00000024854 | ENSAOCP00000020316 | EGF-like domain-containing protein. | EGF-like domain-containing protein. | 0.812 |
LOC111564821 | tnfaip6 | ENSAOCP00000024854 | ENSAOCP00000027955 | EGF-like domain-containing protein. | Tumor necrosis factor, alpha-induced protein 6. | 0.597 |
LOC111567845 | LOC111580399 | ENSAOCP00000002494 | ENSAOCP00000028211 | Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. | Interleukin-1; Belongs to the IL-1 family. | 0.503 |
LOC111567845 | tnfaip6 | ENSAOCP00000002494 | ENSAOCP00000027955 | Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. | Tumor necrosis factor, alpha-induced protein 6. | 0.783 |
LOC111568245 | LOC111580399 | ENSAOCP00000007479 | ENSAOCP00000028211 | TNF superfamily member 11; Belongs to the tumor necrosis factor family. | Interleukin-1; Belongs to the IL-1 family. | 0.563 |
LOC111568245 | tnfaip6 | ENSAOCP00000007479 | ENSAOCP00000027955 | TNF superfamily member 11; Belongs to the tumor necrosis factor family. | Tumor necrosis factor, alpha-induced protein 6. | 0.622 |
LOC111580399 | LOC111567845 | ENSAOCP00000028211 | ENSAOCP00000002494 | Interleukin-1; Belongs to the IL-1 family. | Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. | 0.503 |
LOC111580399 | LOC111568245 | ENSAOCP00000028211 | ENSAOCP00000007479 | Interleukin-1; Belongs to the IL-1 family. | TNF superfamily member 11; Belongs to the tumor necrosis factor family. | 0.563 |
LOC111580399 | cd44 | ENSAOCP00000028211 | ENSAOCP00000016765 | Interleukin-1; Belongs to the IL-1 family. | Link domain-containing protein. | 0.426 |
LOC111580399 | tnfaip6 | ENSAOCP00000028211 | ENSAOCP00000027955 | Interleukin-1; Belongs to the IL-1 family. | Tumor necrosis factor, alpha-induced protein 6. | 0.704 |
cd44 | LOC111580399 | ENSAOCP00000016765 | ENSAOCP00000028211 | Link domain-containing protein. | Interleukin-1; Belongs to the IL-1 family. | 0.426 |
cd44 | tnfaip6 | ENSAOCP00000016765 | ENSAOCP00000027955 | Link domain-containing protein. | Tumor necrosis factor, alpha-induced protein 6. | 0.747 |
ereg | LOC111564821 | ENSAOCP00000020316 | ENSAOCP00000024854 | EGF-like domain-containing protein. | EGF-like domain-containing protein. | 0.812 |
ereg | tnfaip6 | ENSAOCP00000020316 | ENSAOCP00000027955 | EGF-like domain-containing protein. | Tumor necrosis factor, alpha-induced protein 6. | 0.633 |
has1 | tnfaip6 | ENSAOCP00000021719 | ENSAOCP00000027955 | Hyaluronan synthase 1. | Tumor necrosis factor, alpha-induced protein 6. | 0.597 |
has2 | tnfaip6 | ENSAOCP00000006506 | ENSAOCP00000027955 | Hyaluronan synthase 2. | Tumor necrosis factor, alpha-induced protein 6. | 0.597 |
has3 | tnfaip6 | ENSAOCP00000022648 | ENSAOCP00000027955 | Hyaluronan synthase 3. | Tumor necrosis factor, alpha-induced protein 6. | 0.597 |
ptx3 | tnfaip6 | ENSAOCP00000006888 | ENSAOCP00000027955 | Pentraxin 3, long b. | Tumor necrosis factor, alpha-induced protein 6. | 0.818 |
tnfaip6 | LOC111564821 | ENSAOCP00000027955 | ENSAOCP00000024854 | Tumor necrosis factor, alpha-induced protein 6. | EGF-like domain-containing protein. | 0.597 |
tnfaip6 | LOC111567845 | ENSAOCP00000027955 | ENSAOCP00000002494 | Tumor necrosis factor, alpha-induced protein 6. | Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family. | 0.783 |
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