Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC111577936 | UBXN4 | ENSAOCP00000029123 | ENSAOCP00000017421 | Zgc:136908; Belongs to the AAA ATPase family. | UBX domain protein 4. | 0.993 |
LOC111577936 | derl1 | ENSAOCP00000029123 | ENSAOCP00000006469 | Zgc:136908; Belongs to the AAA ATPase family. | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | 0.967 |
LOC111577936 | faf2 | ENSAOCP00000029123 | ENSAOCP00000026876 | Zgc:136908; Belongs to the AAA ATPase family. | Fas associated factor family member 2. | 0.959 |
LOC111577936 | selenos | ENSAOCP00000029123 | ENSAOCP00000021855 | Zgc:136908; Belongs to the AAA ATPase family. | Selenoprotein S. | 0.955 |
LOC111577936 | ubxn1 | ENSAOCP00000029123 | ENSAOCP00000027436 | Zgc:136908; Belongs to the AAA ATPase family. | UBX domain protein 1. | 0.989 |
LOC111577936 | ubxn2a | ENSAOCP00000029123 | ENSAOCP00000004915 | Zgc:136908; Belongs to the AAA ATPase family. | UBX domain protein 2A. | 0.994 |
LOC111577936 | ubxn6 | ENSAOCP00000029123 | ENSAOCP00000014433 | Zgc:136908; Belongs to the AAA ATPase family. | UBX domain protein 6. | 0.993 |
LOC111577936 | ubxn7 | ENSAOCP00000029123 | ENSAOCP00000024128 | Zgc:136908; Belongs to the AAA ATPase family. | UBX domain protein 7. | 0.999 |
LOC111577936 | ufd1 | ENSAOCP00000029123 | ENSAOCP00000019677 | Zgc:136908; Belongs to the AAA ATPase family. | Ubiquitin recognition factor in ER associated degradation 1. | 0.974 |
LOC111577936 | vcpkmt | ENSAOCP00000029123 | ENSAOCP00000004068 | Zgc:136908; Belongs to the AAA ATPase family. | Valosin containing protein lysine (K) methyltransferase. | 0.960 |
UBXN4 | LOC111577936 | ENSAOCP00000017421 | ENSAOCP00000029123 | UBX domain protein 4. | Zgc:136908; Belongs to the AAA ATPase family. | 0.993 |
UBXN4 | faf2 | ENSAOCP00000017421 | ENSAOCP00000026876 | UBX domain protein 4. | Fas associated factor family member 2. | 0.527 |
UBXN4 | ubxn1 | ENSAOCP00000017421 | ENSAOCP00000027436 | UBX domain protein 4. | UBX domain protein 1. | 0.930 |
UBXN4 | ubxn2a | ENSAOCP00000017421 | ENSAOCP00000004915 | UBX domain protein 4. | UBX domain protein 2A. | 0.942 |
UBXN4 | ubxn6 | ENSAOCP00000017421 | ENSAOCP00000014433 | UBX domain protein 4. | UBX domain protein 6. | 0.996 |
UBXN4 | ubxn7 | ENSAOCP00000017421 | ENSAOCP00000024128 | UBX domain protein 4. | UBX domain protein 7. | 0.692 |
UBXN4 | ufd1 | ENSAOCP00000017421 | ENSAOCP00000019677 | UBX domain protein 4. | Ubiquitin recognition factor in ER associated degradation 1. | 0.582 |
derl1 | LOC111577936 | ENSAOCP00000006469 | ENSAOCP00000029123 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Zgc:136908; Belongs to the AAA ATPase family. | 0.967 |
derl1 | faf2 | ENSAOCP00000006469 | ENSAOCP00000026876 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Fas associated factor family member 2. | 0.741 |
derl1 | selenos | ENSAOCP00000006469 | ENSAOCP00000021855 | Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family. | Selenoprotein S. | 0.927 |
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