STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111577916Ral guanine nucleotide dissociation stimulator-like 2. (743 aa)    
Predicted Functional Partners:
LOC111565328
Zgc:55558.
   
 0.694
CSDE1
Cold shock domain containing E1, RNA-binding.
   
 0.694
hras
HRas proto-oncogene, GTPase a.
   
 0.694
kras
V-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog.
   
 0.694
rala
V-ral simian leukemia viral oncogene homolog Aa (ras related).
   
 0.689
LOC111584932
Uncharacterized protein.
   
 0.689
ralb
V-ral simian leukemia viral oncogene homolog Ba (ras related).
   
 0.689
LOC111577911
PHD finger protein 1.
      
 0.584
LOC111585086
Uncharacterized protein.
    
 0.556
LOC111572080
RAP1A, member of RAS oncogene family a.
    
 0.556
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.