STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grik4Glutamate receptor, ionotropic, kainate 4. (933 aa)    
Predicted Functional Partners:
GRIK2
Glutamate ionotropic receptor kainate type subunit 2.
  
 
0.656
LOC111566453
Uncharacterized protein.
  
 
0.656
LOC111575861
Glutamate receptor, ionotropic, kainate 1a.
  
 
0.656
GRIK3
Glutamate ionotropic receptor kainate type subunit 3.
  
 
0.655
LOC111563711
Glutamate receptor, ionotropic, kainate 1b.
  
 
0.655
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.