STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAOCP00000031681Ventral homeobox. (244 aa)    
Predicted Functional Partners:
ENSAOCP00000002075
CTNNB1_binding domain-containing protein.
    
 0.493
tcf7l1
Transcription factor 7 like 1b.
    
 0.493
tcf7l2
Transcription factor 7 like 2.
    
 0.493
ENSAOCP00000026289
CTNNB1_binding domain-containing protein.
    
 0.493
lef1
Lymphoid enhancer-binding factor 1.
    
 0.493
LOC111566135
Transcription factor 7.
    
 0.493
LOC111582028
POU domain protein.
  
 0.491
LOC111567541
Si:ch211-212k18.5.
   
 0.463
sall3
Spalt-like transcription factor 3a.
   
 0.463
ENSAOCP00000010633
Uncharacterized protein.
   
 0.463
Your Current Organism:
Amphiprion ocellaris
NCBI taxonomy Id: 80972
Other names: A. ocellaris, clown anemonefish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.