STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100706129Zgc:153675. (127 aa)    
Predicted Functional Partners:
polr3b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.585
nxph2
Neurexophilin; May be signaling molecules that resemble neuropeptides.
  
     0.487
prdm4
PR domain containing 4.
      
 0.476
LOC100704979
Protein S100; Belongs to the S-100 family.
  
     0.468
sncb
Beta-synuclein; Belongs to the synuclein family.
      
 0.463
LOC100694611
Mgat4 family member C.
      
 0.463
fbxo7
F-box protein 7.
      
 0.455
LOC100690321
Bone morphogenetic protein/retinoic acid inducible neural-specific 2.
  
     0.428
LOC100695984
Melanocortin 4 receptor.
  
     0.405
LOC100693650
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
  
     0.400
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.