STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a47Solute carrier family 25 member 47a; Belongs to the mitochondrial carrier (TC 2.A.29) family. (303 aa)    
Predicted Functional Partners:
LOC100698949
Acyl-CoA synthetase family member 2.
   
 0.586
LOC100692150
Uncharacterized protein.
   
 0.586
aasdh
Aminoadipate-semialdehyde dehydrogenase.
   
  
 0.528
qrsl1
Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the amidase family. GatA subfamily.
    
 0.526
cpt2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
   
  
 0.487
pgm2
Phosphoglucomutase 2.
    
  0.480
pgm2l1
Phosphoglucomutase 2-like 1.
    
  0.480
Brix1
Brix domain containing 2.
   
  
 0.449
LOC102081866
Interleukin-21 receptor-like isoform X2.
     
  0.427
I3JPD2_ORENI
IL6Ra-bind domain-containing protein.
     
  0.426
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.