STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703385ATP-binding cassette, sub-family D (ALD), member 1. (757 aa)    
Predicted Functional Partners:
abcd3
ATP-binding cassette, sub-family D (ALD), member 3a.
   
 0.962
abcd4
ATP-binding cassette, sub-family D (ALD), member 4.
   
 0.951
pex19
Peroxisomal biogenesis factor 19.
    
 0.937
abcd2
ATP-binding cassette, sub-family D (ALD), member 2.
     
  0.911
LOC100703533
Peroxisomal biogenesis factor 3.
   
 0.805
pxmp4
Peroxisomal membrane protein 4.
   
 
 0.778
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.777
pxmp2
Peroxisomal membrane protein 2; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.728
pex16
Peroxisomal membrane protein PEX16.
     
 0.726
pex2
Peroxisomal biogenesis factor 2.
    
 0.722
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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