Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC100703662Host cell factor C1b. (1753 aa)    
Predicted Functional Partners:
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 0.943
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.921
rbbp5
Retinoblastoma binding protein 5.
   
 0.890
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.882
ENSONIP00000079948
Uncharacterized protein LOC109194435 isoform X1.
    
 0.865
LOC100692647
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.855
setd1a
[histone H3]-lysine4 N-trimethyltransferase SETD1.
   
 0.855
wdr5
WD repeat domain 5.
    
 0.850
wsb1
WD repeat and SOCS box containing 1.
    
 0.850
kansl3
KAT8 regulatory NSL complex subunit 3.
   
 0.832
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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