Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HINT1Histidine triad nucleotide binding protein 1. (126 aa)    
Predicted Functional Partners:
taf1b
TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B.
    
 0.934
rrn3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.771
LOC100694821
TATA box binding protein like 2.
    
 0.765
I3KSC7_ORENI
Uncharacterized protein.
    
 0.765
tbp
TATA box binding protein.
    
 0.765
LOC100690020
Germ cell nuclear acidic peptidase.
    
 0.717
kars1
Lysine--tRNA ligase.
   
 0.710
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
  0.705
suox
Sulfite oxidase.
   
  0.651
cdk20
Cyclin-dependent kinase 20.
    
 0.620
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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