Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
I3IX03_ORENIUncharacterized protein. (294 aa)    
Predicted Functional Partners:
LOC100692890
RAN binding protein 2.
   
 0.575
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
   
 0.555
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.536
mysm1
Myb-like, SWIRM and MPN domains 1.
   
 0.501
NEK9
NIMA related kinase 9.
   
  0.498
mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.481
bub1b
BUB1 mitotic checkpoint serine/threonine kinase Bb.
   
 0.472
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.472
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.470
tex10
Testis expressed 10.
   
 0.462
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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