STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100698302Vesicle amine transport 1. (469 aa)    
Predicted Functional Partners:
LOC100711605
Malate synthase-like.
  
  
 0.615
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.614
adhfe1
Alcohol dehydrogenase iron containing 1.
     
 0.576
Fasn
Coiled-coil domain containing 57.
  
0.535
LOC100711357
Uncharacterized protein LOC100711629.
  
 0.535
LOC100711898
Uncharacterized protein LOC100711898.
  
 0.535
I3K9K7_ORENI
Deoxyribose-phosphate aldolase (putative).
    
 0.528
atp5f1d
ATP synthase F1 subunit delta.
   
 0.459
palb2
PALB2_WD40 domain-containing protein.
  
 
 0.455
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.455
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.