STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNPT1Polyribonucleotide nucleotidyltransferase 1. (767 aa)    
Predicted Functional Partners:
LOC102081219
SUV3-like helicase.
   
 0.976
ENSONIP00000039039
SUV3-like helicase.
   
 0.976
Pmpca
Peptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family.
  
 
 0.906
Chek2
Checkpoint kinase 2.
      
 0.895
grsf1
G-rich RNA sequence binding factor 1.
    
 
 0.823
fdxacb1
Ferredoxin-fold anticodon binding domain containing 1.
  
  
 0.800
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
  
 
 0.798
LOC100705312
Ubiquinol-cytochrome c reductase core protein 1.
  
 
 0.798
exosc10
Exosome component 10.
   
 
 0.781
nup153
Nucleoporin 153.
   
   0.763
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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