STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a21Solute carrier family 25 member 21; Belongs to the mitochondrial carrier (TC 2.A.29) family. (299 aa)    
Predicted Functional Partners:
tbx20
T-box transcription factor 20.
    
   0.965
blvra
Biliverdin reductase A.
   
   0.648
LOC100709519
Family with sequence similarity 3 member D.
      
 0.629
mrpl57
Mitochondrial ribosomal protein L57.
      
 0.623
Mrpl1
Mitochondrial ribosomal protein L1.
   
  
 0.620
LOC100702570
Deoxyribonuclease I-like 1.
    
   0.596
LOC100699025
Deoxyribonuclease; Belongs to the DNase I family.
    
   0.596
LOC100700560
Deoxyribonuclease-1 isoform X1.
    
   0.596
I3J2I2_ORENI
Deoxyribonuclease; Belongs to the DNase I family.
    
   0.596
pax9
Paired box 9.
      
 0.593
Your Current Organism:
Oreochromis niloticus
NCBI taxonomy Id: 8128
Other names: Nile tilapia, O. niloticus, Oreochromis nilotica, Tilapia nilotica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.